ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xdeC2 - ECOD Domain | ECOD

ECOD/Domains/e5xdeC2

e5xdeC2

UID: 002100166

PDB

Range: C:234-414
PDB: 5XDE chain C(all domains)
UniProt: Q9LBX2 (all domains)
Gene: tdsC

Molecule: Thermophilic dibenzothiophene desulfurization enzyme C

3D Structure

Loading viewer...

Related Domains

Browse other domains in Acyl-CoA_dh_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6)

TT-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6.1)

FFamilyAcyl-CoA_dh_2(633.6.1.4)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
dibenzothiophene83R

+ 2 additives (Glycerin, Sulfate ion)

Glycerin

Pfam Families

PF08028Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

ClanCL0087Acyl-CoA_dh

External Links

ECOD PDB View: 5XDE RCSB PDB: 5XDE PDBe: 5XDE UniProt: Q9LBX2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.