ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lpkF1 - ECOD Domain | ECOD

ECOD/Domains/e5lpkF1

e5lpkF1

UID: 002101130

PDB

Range: F:1047-1161
PDB: 5LPK chain F(all domains)
UniProt: Q09472 (all domains)
Gene: EP300

Molecule: Histone acetyltransferase p300

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

~{N}-[(3-chlorophenyl)methyl]-4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrole-2-carboxamideXDM

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5LPK RCSB PDB: 5LPK PDBe: 5LPK UniProt: Q09472

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.