ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o4cH2 - ECOD Domain | ECOD

ECOD/Domains/e5o4cH2

e5o4cH2

UID: 002101202

PDB

Range: H:37-258
PDB: 5O4C chain H(all domains)
UniProt: P06008 (all domains)
Gene: puhA

Molecule: Reaction center protein H chain

3D Structure

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Related Domains

Browse other domains in Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupPRC-barrel domain(4.6)

TT-groupPRC-barrel domain(4.6.1)

FFamilyPhotosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain(4.6.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Dodecyldimethylamine N-oxide, Sulfate ion)

Dodecyldimethylamine N-oxideLDA
DrugBank DB04147
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from .

Pfam Families

Photosynthetic reaction centre, H-chain N-terminal region

ClanCL0350PRC-barrel

PRC-barrel domain

ClanCL0350PRC-barrel

External Links

ECOD PDB View: 5O4C RCSB PDB: 5O4C PDBe: 5O4C UniProt: P06008

Downloads

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