ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5o9zj1 - ECOD Domain | ECOD

ECOD/Domains/e5o9zj1

e5o9zj1

UID: 002101249

PDB

Range: j:15-92
PDB: 5O9Z chain j(all domains)
UniProt: P62304 (all domains)
Gene: SNRPE

Molecule: Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LSM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyLSM(4.1.1.19)

Pfam Families

LSM domain

ClanCL0986Sm-like

External Links

ECOD PDB View: 5O9Z RCSB PDB: 5O9Z PDBe: 5O9Z UniProt: P62304

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure