ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xonB7 - ECOD Domain | ECOD

ECOD/Domains/e5xonB7

e5xonB7

UID: 002101987

PDB

Range: B:9-57,B:77-121,B:155-209,B:398-534
PDB: 5XON chain B(all domains)
UniProt: C4QZQ7 (all domains)
Gene: PAS_chr2-1_0125

Molecule: DNA-directed RNA polymerase subunit beta (EC 2.7.7.6)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010)

HH-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1)

TT-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1.1)

FFamilyRNA_pol_Rpb2_1,RNA_pol_Rpb2_3(4010.1.1.2)

Pfam Families

PF04563RNA_pol_Rpb2_1

RNA polymerase beta subunit

PF04565RNA_pol_Rpb2_3

RNA polymerase Rpb2, domain 3

External Links

ECOD PDB View: 5XON RCSB PDB: 5XON PDBe: 5XON UniProt: C4QZQ7

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