ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xonW2 - ECOD Domain | ECOD

ECOD/Domains/e5xonW2

e5xonW2

UID: 002102006

PDB

Range: W:213-313
PDB: 5XON chain W(all domains)
UniProt: C4R370 (all domains)
Gene: PAS_chr3_1136

Molecule: Transcription elongation factor SPT5 (Chromatin Elongation factor SPT5) (Transcription elongation factor spt5)

3D Structure

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Related Domains

Browse other domains in Spt5-NGN →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupN-utilization substance G protein NusG, N-terminal domain(304.17)

TT-groupN-utilization substance G protein NusG, N-terminal domain(304.17.1)

FFamilySpt5-NGN(304.17.1.2)

Pfam Families

PF03439Spt5-NGN

Early transcription elongation factor of RNA pol II, NGN section

ClanCL0439NusG-like

External Links

ECOD PDB View: 5XON RCSB PDB: 5XON PDBe: 5XON UniProt: C4R370

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