ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y34B1 - ECOD Domain | ECOD

ECOD/Domains/e5y34B1

e5y34B1

UID: 002102026

PDB

Range: B:11-191
PDB: 5Y34 chain B(all domains)
UniProt: A0A066ZR71 (all domains)
Gene: EI16_00025

Molecule: Membrane-bound hydrogenase small subunit

3D Structure

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Related Domains

Browse other domains in Oxidored_q6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyOxidored_q6(2007.1.3.3)

Ligands

in contact, ≤ 4 Å

FE4-S3 CLUSTERSF3
FE3-S4 CLUSTERF3S
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01058Oxidored_q6

NADH ubiquinone oxidoreductase, 20 Kd subunit

ClanCL0304CheY

External Links

ECOD PDB View: 5Y34 RCSB PDB: 5Y34 PDBe: 5Y34 UniProt: A0A066ZR71

Downloads

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