ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gtfB1 - ECOD Domain | ECOD

ECOD/Domains/e5gtfB1

e5gtfB1

UID: 002103325

PDB

Range: B:20-168
PDB: 5GTF chain B(all domains)
UniProt: P59082 (all domains)
Gene: LFS

Molecule: Lachrymatory-factor synthase

3D Structure

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Related Domains

Browse other domains in Polyketide_cyc2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyPolyketide_cyc2(331.3.1.11)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10604Polyketide_cyc2

Polyketide cyclase / dehydrase and lipid transport

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 5GTF RCSB PDB: 5GTF PDBe: 5GTF UniProt: P59082

Downloads

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