ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k1aB3 - ECOD Domain | ECOD

ECOD/Domains/e5k1aB3

e5k1aB3

UID: 002104608

RepresentativePDB

Range: B:562-604,B:632-675
PDB: 5K1A chain B(all domains)
UniProt: Q8TAF3 (all domains)
Gene: WDR48

Molecule: WD repeat-containing protein 48 (USP1-associated factor 1) (WD repeat endosomal protein) (p80)

3D Structure

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Related Domains

Browse other domains in DUF3337 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyDUF3337(221.1.1.43)

Pfam Families

PF11816Ubl_WDR48-Bun107

WDR48/Bun107, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5K1A RCSB PDB: 5K1A PDBe: 5K1A UniProt: Q8TAF3

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