ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5okzR3 - ECOD Domain | ECOD

ECOD/Domains/e5okzR3

e5okzR3

UID: 002105566

PDB

Range: R:102-196
PDB: 5OKZ chain R(all domains)
UniProt: P38792 (all domains)
Gene: RRP4

Molecule: Exosome complex component RRP4 (Ribosomal RNA-processing protein 4)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRP4_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRRP4_S1(2.1.1.109)

Pfam Families

PF21266S1_RRP4

RRP4, S1 domain

ClanCL0021OB

External Links

ECOD PDB View: 5OKZ RCSB PDB: 5OKZ PDBe: 5OKZ UniProt: P38792

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure