ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5w4k2Z1 - ECOD Domain | ECOD

ECOD/Domains/e5w4k2Z1

e5w4k2Z1

UID: 002106155

PDB

Range: 2Z:1-92
PDB: 5W4K chain 2Z(all domains)
UniProt: Q5SHZ1 (all domains)
Gene: rplY

Molecule: Large ribosomal subunit protein bL25 (50S ribosomal protein L25) (TL7)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L25p →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L25-like(239)

HH-groupRibosomal protein L25-like(239.1)

TT-groupRibosomal protein L25-like(239.1.1)

FFamilyRibosomal_L25p(239.1.1.3)

Pfam Families

PF01386Ribosomal_L25p

Ribosomal L25p family

ClanCL0733Ribosomal_L25

External Links

ECOD PDB View: 5W4K RCSB PDB: 5W4K PDBe: 5W4K UniProt: Q5SHZ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure