ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mgaA1 - ECOD Domain | ECOD

ECOD/Domains/e5mgaA1

e5mgaA1

UID: 002106762

PDB

Range: A:339-410,A:413-589
PDB: 5MGA chain A(all domains)
UniProt: A0Q7Q2 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a (EC 3.1.21.1) (EC 4.6.1.22) (CRISPR-associated endonuclease Cpf1) (FnCas12a) (FnCpf1)

3D Structure

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Related Domains

Browse other domains in cas_Cpf1_2nd →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071)

HH-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1)

TT-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1.1)

FFamilycas_Cpf1_2nd(1071.1.1.1)

Pfam Families

PF21918cas_Cpf1_2nd

CRISPR-associated endonuclease Cpf1 REC2 domain

External Links

ECOD PDB View: 5MGA RCSB PDB: 5MGA PDBe: 5MGA UniProt: A0Q7Q2

Downloads

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