ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ng6A3 - ECOD Domain | ECOD

ECOD/Domains/e5ng6A3

e5ng6A3

UID: 002106771

PDB

Range: A:1085-1247
PDB: 5NG6 chain A(all domains)
UniProt: A0Q7Q2 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a (EC 3.1.21.1) (EC 4.6.1.22) (CRISPR-associated endonuclease Cpf1) (FnCas12a) (FnCpf1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in NUC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCRISPR-associated endonuclease Cpf1 nuclease domain(1068)

HH-groupCRISPR-associated endonuclease Cpf1 nuclease domain(1068.1)

TT-groupCRISPR-associated endonuclease Cpf1 nuclease domain(1068.1.1)

FFamilyNUC(1068.1.1.1)

Pfam Families

Nuclease domain

External Links

ECOD PDB View: 5NG6 RCSB PDB: 5NG6 PDBe: 5NG6 UniProt: A0Q7Q2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure