ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k64A1 - ECOD Domain | ECOD

ECOD/Domains/e5k64A1

e5k64A1

UID: 002114404

PDB

Range: A:342-443
PDB: 5K64 chain A(all domains)

Molecule: Ig gamma-1 chain C region

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

GlycerinGOL
DrugBank DB09462
2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer.

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 5K64 RCSB PDB: 5K64 PDBe: 5K64

Downloads

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Drug annotations from DrugDomain.