ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ijoV1 - ECOD Domain | ECOD

ECOD/Domains/e5ijoV1

e5ijoV1

UID: 002115888

PDB

Range: V:1-460,V:488-490,V:526-939
PDB: 5IJO chain V(all domains)
UniProt: Q5SRE5 (all domains)
Gene: NUP188

Molecule: Nucleoporin NUP188 (hNup188)

3D Structure

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Related Domains

Browse other domains in Nup188_N,Nup188_N-subdom_III →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNup188_N,Nup188_N-subdom_III(109.4.1.151)

Pfam Families

PF10487Nup188_N

Nucleoporin Nup188, N-terminal

ClanCL0020TPR

PF21093Nup188_N-subdom_III

Nucleoporin Nup188, N-terminal subdomain III

ClanCL0020TPR

External Links

ECOD PDB View: 5IJO RCSB PDB: 5IJO PDBe: 5IJO UniProt: Q5SRE5

Downloads

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