ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gviC1 - ECOD Domain | ECOD

ECOD/Domains/e5gviC1

e5gviC1

UID: 002116907

PDB

Range: C:1-72
PDB: 5GVI chain C(all domains)
UniProt: P62983 (all domains)
Gene: Rps27a

Molecule: Ubiquitin-ribosomal protein eS31 fusion protein (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31 (40S ribosomal protein S27a)]

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5GVI RCSB PDB: 5GVI PDBe: 5GVI UniProt: P62983

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