ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ny5B2 - ECOD Domain | ECOD

ECOD/Domains/e5ny5B2

e5ny5B2

UID: 002117158

PDB

Range: B:335-491
PDB: 5NY5 chain B(all domains)
UniProt: B2DCZ6 (all domains)

Molecule: 3,4-dihydroxybenzoate decarboxylase

3D Structure

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Related Domains

Browse other domains in UbiD_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupUbiD C-terminal domain-like(327.12)

TT-groupUbiD C-terminal domain-like(327.12.1)

FFamilyUbiD_C(327.12.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

3-octaprenyl-4-hydroxybenzoate carboxy-lyase C-terminal domain

External Links

ECOD PDB View: 5NY5 RCSB PDB: 5NY5 PDBe: 5NY5 UniProt: B2DCZ6

Downloads

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