ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5oikA6 - ECOD Domain | ECOD

ECOD/Domains/e5oikA6

e5oikA6

UID: 002117215

PDB

Range: A:389-449
PDB: 5OIK chain A(all domains)
UniProt: G3MZY8 (all domains)
Gene: POLR2A

Molecule: DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (3'-5' exoribonuclease) (EC 3.1.13.-) (RNA-directed RNA polymerase II subunit RPB1) (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase(275)

HH-groupMoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase(275.1)

TT-groupMoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase(275.1.1)

FFamilyRNA_pol_Rpb1_2(275.1.1.1)

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

External Links

ECOD PDB View: 5OIK RCSB PDB: 5OIK PDBe: 5OIK UniProt: G3MZY8

Downloads

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