ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y8rA1 - ECOD Domain | ECOD

ECOD/Domains/e5y8rA1

e5y8rA1

UID: 002117687

PDB

Range: A:5-231
PDB: 5Y8R chain A(all domains)
UniProt: Q9U6Y4 (all domains)

Molecule: GFP-like fluorescent chromoprotein FP538 (zFP538) [Cleaved into: GFP-like fluorescent chromoprotein FP538 chain 1; GFP-like fluorescent chromoprotein FP538 chain 2]

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 5Y8R RCSB PDB: 5Y8R PDBe: 5Y8R UniProt: Q9U6Y4

Downloads

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