ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xtiAP1 - ECOD Domain | ECOD

ECOD/Domains/e5xtiAP1

e5xtiAP1

UID: 002117923

PDB

Range: AP:79-147
PDB: 5XTI chain AP(all domains)
UniProt: P47985 (all domains)
Gene: UQCRFS1

Molecule: Cytochrome b-c1 complex subunit Rieske, mitochondrial

3D Structure

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Related Domains

Browse other domains in UCR_TM →

Classification

AArchitectureextended segments(a.20)

XX-groupiron-sulfur subunit (ISP) transmembrane anchor(5014)

HH-groupiron-sulfur subunit (ISP) transmembrane anchor(5014.1)

TT-groupiron-sulfur subunit (ISP) transmembrane anchor(5014.1.1)

FFamilyUCR_TM(5014.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
PhosphatidylethanolaminePEE
drugDrugBank DB04327

Pfam Families

Ubiquinol cytochrome reductase transmembrane region

ClanCL0300TAT

External Links

ECOD PDB View: 5XTI RCSB PDB: 5XTI PDBe: 5XTI UniProt: P47985

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL

Shown in the structure viewer. Drug annotations from DrugDomain.