ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ifnB1 - ECOD Domain | ECOD

ECOD/Domains/e5ifnB1

e5ifnB1

UID: 002120696

PDB

Range: B:154-250
PDB: 5IFN chain B(all domains)
UniProt: Q8WXF1 (all domains)
Gene: PSPC1

Molecule: Paraspeckle component 1 (Paraspeckle protein 1)

3D Structure

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Related Domains

Browse other domains in RRM_1,NOPS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1,NOPS(304.9.1.3)

Pfam Families

RNA recognition motif

ClanCL0221RRM

NOPS (NUC059) domain

External Links

ECOD PDB View: 5IFN RCSB PDB: 5IFN PDBe: 5IFN UniProt: Q8WXF1

Downloads

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