ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5u01C1 - ECOD Domain | ECOD

ECOD/Domains/e5u01C1

e5u01C1

UID: 002123253

PDB

Range: C:190-291
PDB: 5U01 chain C(all domains)
UniProt: Q04207 (all domains)
Gene: Rela

Molecule: Transcription factor p65 (Nuclear factor NF-kappa-B p65 subunit) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RHD_dimer →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyRHD_dimer(11.1.1.197)

Pfam Families

PF16179RHD_dimer

Rel homology dimerisation domain

ClanCL0159E-set

External Links

ECOD PDB View: 5U01 RCSB PDB: 5U01 PDBe: 5U01 UniProt: Q04207

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure