ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vn5C1 - ECOD Domain | ECOD

ECOD/Domains/e5vn5C1

e5vn5C1

UID: 002123369

PDB

Range: C:1-332
PDB: 5VN5 chain C(all domains)
UniProt: G2IN02 (all domains)

Molecule: 2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl meta-cleavage compound hydrolase

3D Structure

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Related Domains

Browse other domains in Amidohydro_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_2(2002.1.1.134)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04909Amidohydro_2

Amidohydrolase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5VN5 RCSB PDB: 5VN5 PDBe: 5VN5 UniProt: G2IN02

Downloads

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