ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5nj5D2 - ECOD Domain | ECOD

ECOD/Domains/e5nj5D2

e5nj5D2

UID: 002123822

PDB

Range: D:7-111
PDB: 5NJ5 chain D(all domains)
UniProt: P0AFK0 (all domains)
Gene: pmbA

Molecule: Metalloprotease PmbA (EC 3.4.-.-) (Protein TldE)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PmbA_TldD_1st →

Classification

AArchitecturea+b two layers(a.11)

XX-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512)

HH-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512.1)

TT-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512.1.1)

FFamilyPmbA_TldD_1st(512.1.1.1)

Pfam Families

PF01523PmbA_TldD_1st

PmbA/TldA metallopeptidase domain 1

External Links

ECOD PDB View: 5NJ5 RCSB PDB: 5NJ5 PDBe: 5NJ5 UniProt: P0AFK0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure