ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5njbD1 - ECOD Domain | ECOD

ECOD/Domains/e5njbD1

e5njbD1

UID: 002123857

PDB

Range: D:112-235
PDB: 5NJB chain D(all domains)
UniProt: P0AFK0 (all domains)
Gene: pmbA

Molecule: Metalloprotease PmbA (EC 3.4.-.-) (Protein TldE)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PmbA_TldD_2nd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512)

HH-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512.1)

TT-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512.1.1)

FFamilyPmbA_TldD_2nd(512.1.1.2)

Pfam Families

PF19290PmbA_TldD_2nd

PmbA/TldA metallopeptidase central domain

External Links

ECOD PDB View: 5NJB RCSB PDB: 5NJB PDBe: 5NJB UniProt: P0AFK0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure