ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ojjD1 - ECOD Domain | ECOD

ECOD/Domains/e5ojjD1

e5ojjD1

UID: 002123975

PDB

Range: D:4-154
PDB: 5OJJ chain D(all domains)
UniProt: Q9NPD8 (all domains)
Gene: UBE2T

Molecule: Ubiquitin-conjugating enzyme E2 T

3D Structure

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Related Domains

Browse other domains in UQ_con →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUQ_con(216.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin-conjugating enzyme

ClanCL0208UBC

External Links

ECOD PDB View: 5OJJ RCSB PDB: 5OJJ PDBe: 5OJJ UniProt: Q9NPD8

Downloads

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