ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ngmAk1 - ECOD Domain | ECOD

ECOD/Domains/e5ngmAk1

e5ngmAk1

UID: 002124418

PDB

Range: Ak:15-128
PDB: 5NGM chain Ak(all domains)
UniProt: A0A077UKD6 (all domains)
Gene: rpsK

Molecule: Small ribosomal subunit protein uS11

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S11 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRibosomal_S11(2484.1.1.7)

Pfam Families

PF00411Ribosomal_S11

Ribosomal protein S11

ClanCL0267S11_L18p

External Links

ECOD PDB View: 5NGM RCSB PDB: 5NGM PDBe: 5NGM UniProt: A0A077UKD6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure