ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lq6A1 - ECOD Domain | ECOD

ECOD/Domains/e3lq6A1

e3lq6A1

UID: 002126884

RepresentativePDB

Range: A:228-540
PDB: 3LQ6 chain A(all domains)
UniProt: Q2V8W4 (all domains)

Molecule: Capsid protein VP1 (Coat protein)

3D Structure

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Related Domains

Browse other domains in Calici_coat_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalici_coat_C(10.2.1.43)

Pfam Families

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 3LQ6 RCSB PDB: 3LQ6 PDBe: 3LQ6 UniProt: Q2V8W4

Downloads

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