ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3m4yA2 - ECOD Domain | ECOD

ECOD/Domains/e3m4yA2

e3m4yA2

UID: 002126898

RepresentativePDB

Range: A:23-445
PDB: 3M4Y chain A(all domains)
UniProt: O57728 (all domains)
Gene: atpA

Molecule: V-type ATP synthase alpha chain

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetic acid, (4r)-2-Methylpentane-2,4-Diol)

Acetic acidACY
DrugBank DB03166
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer.

External Links

ECOD PDB View: 3M4Y RCSB PDB: 3M4Y PDBe: 3M4Y UniProt: O57728

Downloads

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Drug annotations from DrugDomain.