ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ok7C1 - ECOD Domain | ECOD

ECOD/Domains/e5ok7C1

e5ok7C1

UID: 002129333

PDB

Range: C:4-478
PDB: 5OK7 chain C(all domains)
UniProt: W8QF82 (all domains)
Gene: gan1D

Molecule: Putative 6-phospho-beta-galactobiosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_1(2002.1.1.12)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Imidazole)

GlycerinGOL
DrugBank DB09462
ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00232Glyco_hydro_1

Glycosyl hydrolase family 1

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5OK7 RCSB PDB: 5OK7 PDBe: 5OK7 UniProt: W8QF82

Downloads

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