ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5tiqB2 - ECOD Domain | ECOD

ECOD/Domains/e5tiqB2

e5tiqB2

UID: 002129441

PDB

Range: B:222-437
PDB: 5TIQ chain B(all domains)
UniProt: P30328 (all domains)
Gene: A430L

Molecule: Major capsid protein (MCP) (Vp54)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Capsid_NCLDV →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCapsid_NCLDV(10.2.1.41)

Pfam Families

PF04451Capsid_NCLDV

Large eukaryotic DNA virus major capsid protein

ClanCL0611Hexon

External Links

ECOD PDB View: 5TIQ RCSB PDB: 5TIQ PDBe: 5TIQ UniProt: P30328

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure