ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n5nA1 - ECOD Domain | ECOD

ECOD/Domains/e5n5nA1

e5n5nA1

UID: 002130300

PDB

Range: A:1-245
PDB: 5N5N chain A(all domains)
UniProt: P07437 (all domains)
Gene: TUBB

Molecule: Tubulin beta chain

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

Phosphomethylphosphonic acid guanylate esterG2P
drugDrugBank DB03532
Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137within 5 Å only

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5N5N RCSB PDB: 5N5N PDBe: 5N5N UniProt: P07437

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.