ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o11A1 - ECOD Domain | ECOD

ECOD/Domains/e5o11A1

e5o11A1

UID: 002130417

PDB

Range: A:34-305
PDB: 5O11 chain A(all domains)
UniProt: P11309 (all domains)
Gene: PIM1

Molecule: Serine/threonine-protein kinase pim-1

3D Structure

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Related Domains

Browse other domains in Pkinase, Kdo →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Kdo(206.1.1.71)

Ligands

in contact, ≤ 4 Å

Silmitasertib3NG
drugDrugBank DB15408
Chloride ionCL

+ 2 additives (Glycerin, Imidazole)

Glycerin

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

Lipopolysaccharide kinase (Kdo/WaaP) family

ClanCL0016PKinase

External Links

ECOD PDB View: 5O11 RCSB PDB: 5O11 PDBe: 5O11 UniProt: P11309

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

ImidazoleIMD

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.