ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ot2C2 - ECOD Domain | ECOD

ECOD/Domains/e5ot2C2

e5ot2C2

UID: 002130513

PDB

Range: C:3-37,C:173-267
PDB: 5OT2 chain C(all domains)
UniProt: P16370 (all domains)
Gene: RPB3

Molecule: DNA-directed RNA polymerase II subunit RPB3 (RNA polymerase II subunit 3) (RNA polymerase II subunit B3) (B44.5) (DNA-directed RNA polymerase II 45 kDa polypeptide)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L(305.1.1.1)

Pfam Families

PF01193RNA_pol_L

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

ECOD PDB View: 5OT2 RCSB PDB: 5OT2 PDBe: 5OT2 UniProt: P16370

Downloads

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