ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wkgB1 - ECOD Domain | ECOD

ECOD/Domains/e5wkgB1

e5wkgB1

UID: 002130730

PDB

Range: B:3-99
PDB: 5WKG chain B(all domains)
UniProt: P61769 (all domains)
Gene: B2M

Molecule: Beta-2-microglobulin

3D Structure

Loading viewer...

Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Iodide ionIOD
Sodium ionNA
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 5WKG RCSB PDB: 5WKG PDBe: 5WKG UniProt: P61769

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.