ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wq8B4 - ECOD Domain | ECOD

ECOD/Domains/e5wq8B4

e5wq8B4

UID: 002131947

PDB

Range: B:321-646
PDB: 5WQ8 chain B(all domains)
UniProt: P45779 (all domains)
Gene: epsD

Molecule: Secretin GspD (Cholera toxin secretion protein EpsD) (General secretion pathway protein D) (GspD) (Type II secretion system protein D) (T2SS protein D)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupRing-building motif II in type III secretion system(327.16)

TT-groupRing-building motif II in type III secretion system(327.16.1)

FFamilySecretin(327.16.1.1)

Pfam Families

PF00263Secretin

Bacterial type II and III secretion system protein

External Links

ECOD PDB View: 5WQ8 RCSB PDB: 5WQ8 PDBe: 5WQ8 UniProt: P45779

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