ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5h52A3 - ECOD Domain | ECOD

ECOD/Domains/e5h52A3

e5h52A3

UID: 002136378

PDB

Range: A:3-99,A:590-679
PDB: 5H52 chain A(all domains)
UniProt: P02787 (all domains)
Gene: TF

Molecule: Serotransferrin

3D Structure

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Related Domains

Browse other domains in Transferrin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTransferrin(7523.1.1.2)

Ligands

in contact, ≤ 4 Å

Titanium ion4TI
metal

+ 2 additives (Citric acid, Malonate Ion)

Citric acidCIT
DrugBank DB04272
Malonate IonMLI

Pfam Families

PF00405Transferrin

Transferrin

ClanCL0177PBP

External Links

ECOD PDB View: 5H52 RCSB PDB: 5H52 PDBe: 5H52 UniProt: P02787

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02201within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.