ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5o95B2 - ECOD Domain | ECOD

ECOD/Domains/e5o95B2

e5o95B2

UID: 002136499

PDB

Range: B:76-244
PDB: 5O95 chain B(all domains)
UniProt: Q5ZRE6 (all domains)
Gene: lpg2936

Molecule: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltrans_RNA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyMethyltrans_RNA(2488.1.1.12)

Pfam Families

PF04452Methyltrans_RNA

RNA methyltransferase domain

ClanCL0098SPOUT

External Links

ECOD PDB View: 5O95 RCSB PDB: 5O95 PDBe: 5O95 UniProt: Q5ZRE6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure