ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5o96E1 - ECOD Domain | ECOD

ECOD/Domains/e5o96E1

e5o96E1

UID: 002136512

PDB

Range: E:3-75
PDB: 5O96 chain E(all domains)
UniProt: Q5ZRE6 (all domains)
Gene: lpg2936

Molecule: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PUA_4 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyPUA_4(1.1.9.20)

Pfam Families

RNA methyltransferase PUA domain

ClanCL0178PUA

External Links

ECOD PDB View: 5O96 RCSB PDB: 5O96 PDBe: 5O96 UniProt: Q5ZRE6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure