ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vvrD1 - ECOD Domain | ECOD

ECOD/Domains/e5vvrD1

e5vvrD1

UID: 002137636

PDB

Range: D:4-71,D:131-221
PDB: 5VVR chain D(all domains)
UniProt: P20433 (all domains)
Gene: RPB4

Molecule: DNA-directed RNA polymerase II subunit RPB4 (RNA polymerase II subunit B4) (B32) (DNA-directed RNA polymerase II 32 kDa polypeptide)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyRNA_pol_Rpb4(102.1.1.11)

Pfam Families

PF03874RNA_pol_Rpb4

RNA polymerase Rpb4

ClanCL0426HRDC-like

External Links

ECOD PDB View: 5VVR RCSB PDB: 5VVR PDBe: 5VVR UniProt: P20433

Downloads

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