ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vvrI1 - ECOD Domain | ECOD

ECOD/Domains/e5vvrI1

e5vvrI1

UID: 002137643

PDB

Range: I:1-49
PDB: 5VVR chain I(all domains)
UniProt: P27999 (all domains)
Gene: RPB9

Molecule: DNA-directed RNA polymerase II subunit RPB9 (RNA polymerase II subunit B9) (B12.6) (DNA-directed RNA polymerase II 14.2 kDa polypeptide) (DNA-directed RNA polymerase II subunit 9)

3D Structure

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Related Domains

Browse other domains in RNA_POL_M_15KD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRNA_POL_M_15KD(375.1.1.19)

Pfam Families

PF02150Zn_ribbon_RPB9

RNA polymerases M/15 Kd subunit

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5VVR RCSB PDB: 5VVR PDBe: 5VVR UniProt: P27999

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