ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ypqJ1 - ECOD Domain | ECOD

ECOD/Domains/e5ypqJ1

e5ypqJ1

UID: 002137849

PDB

Range: J:3-147
PDB: 5YPQ chain J(all domains)
UniProt: A3M692 (all domains)
Gene: aroQ

Molecule: 3-dehydroquinate dehydratase

3D Structure

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Related Domains

Browse other domains in DHquinase_II →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupType II 3-dehydroquinate dehydratase(2007.1.12)

FFamilyDHquinase_II(2007.1.12.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01220DHquinase_II

Dehydroquinase class II

External Links

ECOD PDB View: 5YPQ RCSB PDB: 5YPQ PDBe: 5YPQ UniProt: A3M692

Downloads

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