ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bgmA1 - ECOD Domain | ECOD

ECOD/Domains/e6bgmA1

e6bgmA1

UID: 002137939

PDB

Range: A:6-192
PDB: 6BGM chain A(all domains)
UniProt: Q16878 (all domains)
Gene: CDO1

Molecule: Cysteine dioxygenase type 1

3D Structure

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Related Domains

Browse other domains in CDO_I →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCDO_I(10.12.1.29)

Ligands

in contact, ≤ 4 Å

FE (II) IONFE2
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

Cysteine dioxygenase type I

ClanCL0029Cupin

External Links

ECOD PDB View: 6BGM RCSB PDB: 6BGM PDBe: 6BGM UniProt: Q16878

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.