ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m6gA2 - ECOD Domain | ECOD

ECOD/Domains/e5m6gA2

e5m6gA2

UID: 002138174

PDB

Range: A:413-615
PDB: 5M6G chain A(all domains)
UniProt: A4FNP6 (all domains)
Gene: celD

Molecule: Beta-glucosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupBeta-D-glucan exohydrolase, C-terminal domain(2007.12)

TT-groupBeta-D-glucan exohydrolase, C-terminal domain(2007.12.1)

FFamilyGlyco_hydro_3_C(2007.12.1.1)

Ligands

in contact, ≤ 4 Å

SorbitolSOR
drugDrugBank DB01638
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF01915Glyco_hydro_3_C

Glycosyl hydrolase family 3 C-terminal domain

External Links

ECOD PDB View: 5M6G RCSB PDB: 5M6G PDBe: 5M6G UniProt: A4FNP6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.