ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uboA1 - ECOD Domain | ECOD

ECOD/Domains/e5uboA1

e5uboA1

UID: 002141193

PDB

Range: A:3-139
PDB: 5UBO chain A(all domains)
UniProt: P68135 (all domains)
Gene: ACTA1

Molecule: Actin, alpha skeletal muscle

3D Structure

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Related Domains

Browse other domains in Actin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyActin(2484.1.1.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Calcium ionCA
metalwithin 5 Å only

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

Pfam Families

Actin

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 5UBO RCSB PDB: 5UBO PDBe: 5UBO UniProt: P68135

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-DiolMPD

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.