ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6em5q1 - ECOD Domain | ECOD

ECOD/Domains/e6em5q1

e6em5q1

UID: 002141585

PDB

Range: q:227-330
PDB: 6EM5 chain q(all domains)
UniProt: P40991 (all domains)
Gene: NOP2

Molecule: 25S rRNA (cytosine(2870)-C(5))-methyltransferase (EC 2.1.1.310) (Nucleolar protein 2)

3D Structure

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Related Domains

Browse other domains in RsmF-B_ferredox →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNOL1/NOP2/sun N-terminal ferredoxin-like domain(304.137)

TT-groupNOL1/NOP2/sun N-terminal ferredoxin-like domain(304.137.1)

FFamilyRsmF-B_ferredox(304.137.1.3)

Pfam Families

PF22458RsmF-B_ferredox

Methyltr_RsmF/B-like, ferredoxin-like domain

ClanCL0795NSUN_ferredox

External Links

ECOD PDB View: 6EM5 RCSB PDB: 6EM5 PDBe: 6EM5 UniProt: P40991

Downloads

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