ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nc0A1 - ECOD Domain | ECOD

ECOD/Domains/e5nc0A1

e5nc0A1

UID: 002141721

PDB

Range: A:1-125
PDB: 5NC0 chain A(all domains)
UniProt: P00138 (all domains)

Molecule: Cytochrome c'

3D Structure

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Related Domains

Browse other domains in Cytochrom_C_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupCytochromes(601.2)

TT-groupCytochromes(601.2.1)

FFamilyCytochrom_C_2(601.2.1.4)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
NitriteNO2
drugDrugBank DB12529
Nitric oxide

Pfam Families

PF01322Cytochrom_C_2

Cytochrome C'

External Links

ECOD PDB View: 5NC0 RCSB PDB: 5NC0 PDBe: 5NC0 UniProt: P00138

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Nitrate, Sulfate ion, 1,2-ETHANEDIOL)

NitrateNO3
DrugBank DB14049
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.