ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wwvA1 - ECOD Domain | ECOD

ECOD/Domains/e5wwvA1

e5wwvA1

UID: 002142038

PDB

Range: A:1-194,A:288-339
PDB: 5WWV chain A(all domains)
UniProt: P00371 (all domains)
Gene: DAO

Molecule: D-amino-acid oxidase

3D Structure

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Related Domains

Browse other domains in DAO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNucleotide-binding domain(2003.1.3)

FFamilyDAO(2003.1.3.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
(S)-(4-chlorophenyl)-phenyl-methanamine7V3

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Sulfate ion)

(4r)-2-Methylpentane-2,4-Diol

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5WWV RCSB PDB: 5WWV PDBe: 5WWV UniProt: P00371

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.