ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wzeB2 - ECOD Domain | ECOD

ECOD/Domains/e5wzeB2

e5wzeB2

UID: 002142048

PDB

Range: B:1-176
PDB: 5WZE chain B(all domains)
UniProt: Q9HTW6 (all domains)
Gene: pepP

Molecule: Aminopeptidase P

3D Structure

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Related Domains

Browse other domains in AMP_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupCreatinase/prolidase N-terminal domain(2484.3)

TT-groupCreatinase/prolidase N-terminal domain(2484.3.1)

FFamilyAMP_N(2484.3.1.2)

Ligands

in contact, ≤ 4 Å

ProlinePRO
drugDrugBank DB00172
Sodium ionNA
metal
Calcium ionCA

Pfam Families

Aminopeptidase P, N-terminal domain

ClanCL0356AMP_N-like

External Links

ECOD PDB View: 5WZE RCSB PDB: 5WZE PDBe: 5WZE UniProt: Q9HTW6

Downloads

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metalwithin 5 Å only

+ 2 additives (1,2-ETHANEDIOL, Glycerol)

1,2-ETHANEDIOLEDO
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.