ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y6qB1 - ECOD Domain | ECOD

ECOD/Domains/e5y6qB1

e5y6qB1

UID: 002142386

PDB

Range: B:1-117,B:161-226
PDB: 5Y6Q chain B(all domains)
UniProt: Q84IX9 (all domains)
Gene: aomm

Molecule: Aldehyde oxidase medium subunit

3D Structure

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Related Domains

Browse other domains in FAD_binding_5 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupFAD-binding domain-like(217)

HH-groupFAD-binding domain(217.1)

TT-groupFAD-binding domain(217.1.1)

FFamilyFAD_binding_5(217.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Iron/sulfur clusterSF4
within 5 Å only

+ 2 additives (Sulfate ion, Glycerol)

Pfam Families

PF00941FAD_binding_5

FAD binding domain in molybdopterin dehydrogenase

ClanCL0077FAD_PCMH

External Links

ECOD PDB View: 5Y6Q RCSB PDB: 5Y6Q PDBe: 5Y6Q UniProt: Q84IX9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.